Guide

E-Commerce Taxes: Sole Proprietorship, VAT and Withholding

Which taxes apply, sole proprietorship vs limited, and how VAT and withholding work.

Tax is the most-postponed but most-expensive subject in e-commerce. With the right setup you stay legal and avoid overpaying. This guide is general information; for firm decisions always consult an accountant.

Quick answer

The main taxes in e-commerce are income/corporate tax, VAT, and (on marketplace deductions) withholding tax. For continuous selling you must register at least a sole proprietorship; it is fast and cheap, while a limited company is more corporate but costlier. VAT works on the logic of deducting the VAT on purchases and declaring the VAT on sales. Platforms such as Trendyol deduct 1% withholding (income-tax withholding) on payments, which is offset in the annual return. Founders under 29 are offered incentives such as the young-entrepreneur earnings exemption. E-invoice and e-archive are mandatory for businesses above a certain turnover. This guide is general information; consult an accountant for final decisions.

Summary: what you need to know

  • For continuous selling, at least a sole proprietorship is mandatory
  • Main taxes: income/corporate tax, VAT, withholding
  • VAT: purchase VAT is deducted, sales VAT is declared
  • Trendyol deducts 1% withholding on payments, offset in the return
  • The young-entrepreneur exemption benefits founders under 29
  • E-invoice / e-archive are mandatory above a certain turnover
1

Which Taxes Apply in E-Commerce?

E-commerce is a commercial activity and brings several tax types. The first is tax on earnings: income tax (with progressive brackets) for a sole proprietorship, corporate tax for a limited/joint-stock company. The second is VAT (value-added tax); collected on sales, paid on purchases, with the difference declared. The third is withholding; a pre-tax deducted at source on some payments and later offset (such as Trendyol's 1% deduction). Alongside these, if you employ staff, social-security and income-tax withholding arise, and in certain cases stamp duty. Taxes are not "thought about after the sale"; you must factor the tax burden in when designing your model and price. Otherwise a seller who treats most of the turnover as income and spends it hits a cash crunch at filing time. The clear advice: working with an accountant from day one prevents both penalty risk and overpaying tax.

2

Sole Proprietorship vs Limited Company

The choice between the two structures directly affects tax and operating load. Sole proprietorship: fast to set up (usually a day) and cheap, with a relatively light bookkeeping load; earnings are subject to income-tax brackets — advantageous at low earnings, with the rate rising in upper brackets as earnings grow. Liability is personal (your personal assets may be at risk). Limited company: more costly and procedural to set up, with a heavy accounting load; earnings are subject to a flat corporate tax and profit distribution incurs additional withholding; but liability is limited to capital and the corporate perception/partnership option is strong. Practical rule: a sole proprietorship for beginners with modest turnover; a limited company makes sense as turnover grows, partners join and tax optimisation matters. Decide the timing of the switch with an accountant by looking at the earning brackets.

Sole proprietorship Limited company
Setup Fast (usually a day), cheap Costly, procedural
Tax Progressive income tax Flat corporate tax (+dividend withholding)
Accounting load Relatively light Heavy
Liability Personal (personal assets) Limited to capital
Best for Beginners, modest turnover Growing turnover, partnership
3

How VAT Works (Purchase-Sale, Returns)

VAT is a tax levied on added value and passed along the chain. Its logic rests on a deduction mechanism: the VAT you pay buying a product is "deductible VAT", the VAT you collect selling to the customer is "calculated VAT". At period end the deductible VAT is subtracted from the calculated VAT; if the difference is positive it is paid to the state, if deductible VAT is greater it carries to the next period. The general VAT rate in Turkey is 20%; reduced rates of 10% or 1% apply to items such as food, books and some health products. A critical point in e-commerce: the VAT on the marketplace commission invoice is also deductible VAT; a seller who does not include it in the return overpays tax. Another important detail is that the sale price is VAT-included and commission is calculated on this VAT-included price. To declare VAT correctly, you must regularly record all purchase and expense invoices (including commission, shipping and ads).

Critical: the VAT on the marketplace commission invoice is also deductible VAT. A seller who does not include it in the return overpays tax. Record every purchase and expense invoice (commission, shipping, ads).

Add / extract VAT: the VAT calculator
4

Withholding: Marketplace Deductions

Withholding (tax withholding) is a pre-tax deducted at the source of a payment and paid to the tax office; the aim is to secure tax collection. Its best-known example in e-commerce is the 1% withholding Trendyol applies on every payment. This is deducted against the seller's income tax; it is not a lost amount but a prepaid tax, offset against the calculated tax in the annual return. The key is to track this deduction correctly in the accounts and offset it in the return; otherwise the seller pays the withholding and then pays tax again on the same earning, carrying a double burden. On some service purchases (rent, professional-service payments, etc.) the business itself may be obliged to withhold. Separating and recording marketplace deductions (commission, service fee, withholding) per order is necessary both for correct declaration and to catch overcharges.

5

The Young-Entrepreneur and Tradesman Exemptions

Tax legislation offers some incentives to new entrepreneurs; knowing them saves serious money in the early years. The best known is the young-entrepreneur earnings exemption: entrepreneurs who meet certain conditions (generally first-time taxpayers within an age limit, usually under 29) may be exempt from income tax up to a certain annual earning in the first periods of the activity. Social-security premium incentives for new taxpayers may also be on the table. For very small-scale activities meeting certain conditions, a tradesman exemption may apply; however, regular and high-volume marketplace selling is generally outside its scope. The conditions, amounts and durations of these incentives are updated year to year; so confirm which exemption you can use, and under what conditions, against current legislation with an accountant. Wrongly claiming one can lead to a penalised assessment later.

6

E-Invoice and E-Archive Obligations

Digital document rules have become increasingly mandatory in e-commerce. E-invoice is the electronic invoicing system between taxpayers (business to business); e-archive is the electronic invoice issued to final consumers or to those who are not e-invoice taxpayers. For businesses above a certain annual turnover, switching to these systems is mandatory, and the thresholds keep being lowered; in some sectors there may be an obligation regardless of turnover. Most e-commerce businesses selling on marketplaces end up issuing e-archive invoices as their volume grows. Alongside these, e-ledger and other digital applications may come into play. The practical point is to automate the invoicing process to handle the sales volume; issuing each order's invoice manually is impossible at high volume. Running the invoice process automatically with accounting software and marketplace integration saves time and reduces error/penalty risk. Track the current obligation thresholds with an accountant.

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FAQ

FAQ for this guide

Yes. If you sell continuously and commercially, you must register at least a sole proprietorship. Marketplaces and payment providers do not allow invoice-free selling; invoice-free commercial selling is not legal.

For beginners with low-to-mid turnover a sole proprietorship is generally faster and cheaper. As turnover grows, partners join and tax optimisation matters, a limited company makes sense. Plan the switch with an accountant.

Withholding is not a lost amount but a tax prepaid against income tax. It is offset against the calculated tax in the annual return; with correct recording and offset you do not pay double.

Yes. The VAT on the commission invoice is deductible VAT and must be included in the return. A seller who skips it overpays VAT needlessly. You must record all expense invoices.

No, this guide is general information. Tax rates, exemption amounts and obligation thresholds change frequently. Before any final decision for your own situation, you must consult an accountant.

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